I will perform gromacs MD simulation upto 1000ns

I have done Master's in Biotechnology and I have expertise in MD simulation, Molecular docking, In silico vaccine design and SBDD.

I'll perform MD simulation of your

• Protein-drug
• Protein
• Peptide

and provide files and the following graphs:

• RMSD Protein
• RMSD Ligand
• RMSD binding pocket
• HBonds
• Distances
• SASA
• RMSF
• Protein-Ligand Contacts
• Hydrogen Bonding
• Radius of Gyration
• PCA in HTML
• frame by frame ligand
• Principal Component Analysis (PCA)
• MMPBSA
• MMGBSA
• Cross Correlation
• Position of ligand after intervals (PPTs and PNGs)
• MP4 video

I can also do a writeup for this MD simulation and can make a PowerPoint presentation.